Solving the where problem in neuroanatomy: a generative framework with learned mappings to register multimodal, incomplete data into a reference brain

We developed a generative algorithm for registration of micron resolution serial section microscopy images to the Allen reference atlas.

D. J. Tward, X. Li, B. Huo, B. C. Lee, M. Miller, and P. P. Mitra, in bioRxiv.
3D Mapping of Serial Histology Sections with Anomalies Using a Novel Robust Deformable Registration Algorithm
D. Tward, X. Li, B. Huo, B. Lee, P. Mitra, and M. Miller, in Multimodal Brain Image Analysis and Mathematical Foundations of Computational Anatomy.